Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915609.1_cds_XP_016465401.1_58358
CDS Infomation

[gene=LOC107788242] [db_xref=GeneID:107788242] [protein=COP9 signalosome complex subunit 1-like] [protein_id=XP_016465401.1] [location=complement(join(103777..103953,104059..104293,105239..105324,105427..105543,105942..106262,108392..108778))] [gbkey=CDS]
Sequence

ATGGAACCCGACGAGGATTTAGGGCAAATAGCTGACGAGATCTACGCCAACGGCGATGAG
AACTCGCAGCGTCACCAGCCGATTATCAGCGGCGAGCAGCTGGATATTGAGTTGTACGCC
GCCTTATACAGCGGCCGAACAAAAATTATGAGGCTTCTCTTCATAGCTGATCGATGTGGC
AATGCTTCAATGCAATTGGAGGCATTGAGAATGGCCTATGATGAGATTAAAAAAGGGGAG
AACACGCAATTGTTCCGTGAGGTTTTACAGAAGATTGATGGACGTTTAGGACCTAATTAT
GGGCCGGACCCTGCTTGGTCCGACGCTGTGGATCGTCGGGCTGAGCTGAGAAAGGAGAAG
CTTGAGAACGAACTCAACGCTTATAGGACAAATCTGATCAAAGAGAGCATTAGGATGGGA
TACAATGATTTTGGAGATTTCTACTATGCACATGGACAGCTTGGAGAGGCATTTAAGAAT
TATGTTCGTACACGTGATTATTGCACGACTGCAAAGCACATAATTCATATGTGTTTGAAT
GCAATTCTGGTCAGCATTGAGATGGGCCAGTTCACACACGTTGCAAGCTATGTTAGCAAG
GCGGAGCAGAGCCAAGATGCTCTGGAAAGTCTTACAGTTGCAAAACTTCGTTGTGCTGCT
GGGTTGGCTAACTTGGAGGCAAAGAAGTATAAACTTGCTGCTAGGAAGTTCCTGGAAGTT
GGTCCGGAATTAGGTAACAACTACACAGAAGTTATTGCACCCCAAGATGTTGCTACTTAT
GGTGGACTTTGTGCACTTGCAAGTTTTGACCGAGCAGAGCTGAAGAGTAAAGTTATTGAC
AATATTAACTTCAGGAATTTCTTGGAGTTGGTACCTGAGATAAGGGAGCTCATTCATGAT
TTCTACACAAGTCACTATGCTTCTTGTCTGGAGTATCTAGGAAATCTTAAAGCAAATCTG
TTGCTTGACATCCATTTGCATGACCATGTCGAGACGCTGTATGATCAAATCCGTAACAAA
GCTTTAATCCAGTATACCCACCCATTTGTCTCGGTTGATTTGAATATGATGGCCAATGCT
TTCAAGACGAGTGTTGCAGGTTTGGAGAAGGAACTTGAAGCTTTGATCACTGACAACCAA
ATACAGGCTCGAATCGACTCGCACAACAAAATTTTATATGCACGGCATGCTGATCAGAGA
AATGCAACCTTCCAGAAGGTGCTGCAGACAGGCAGGGAATTCGACCGGGATGTCAGATCA
ATGCTTTTGAGAGCAAACCTTCTCAAGCATGAGCACATCCTTAGAGCCTCAAGAAAACAT
TGA

Peptide Sequence

PEP ID

XP_016465401.1
PEP Infomation

PREDICTED: COP9 signalosome complex subunit 1-like [Nicotiana tabacum]
Sequence

MEPDEDLGQIADEIYANGDENSQRHQPIISGEQLDIELYAALYSGRTKIMRLLFIADRCG
NASMQLEALRMAYDEIKKGENTQLFREVLQKIDGRLGPNYGPDPAWSDAVDRRAELRKEK
LENELNAYRTNLIKESIRMGYNDFGDFYYAHGQLGEAFKNYVRTRDYCTTAKHIIHMCLN
AILVSIEMGQFTHVASYVSKAEQSQDALESLTVAKLRCAAGLANLEAKKYKLAARKFLEV
GPELGNNYTEVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHD
FYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLNMMANA
FKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQTGREFDRDVRS
MLLRANLLKHEHILRASRKH

Transcript Sequence

Gene sequence data has not been registered.